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PDBsum entry 5hap

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5hap calculated with MOLE 2.0 PDB id
5hap
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.91 2.55 39.7 -1.27 -0.09 20.5 86 4 3 2 2 1 0 0  PGE 304 A PEG 309 A
2 1.24 1.58 44.5 -2.40 -0.45 20.7 83 7 5 5 1 2 0 0  EDO 309 B
3 1.73 2.12 63.4 -1.52 -0.26 18.6 84 8 6 5 4 2 0 0  PEG 309 A PEG 303 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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