 |
PDBsum entry 5gwt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5gwt calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5gwt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
0 pores,
coloured by radius |
|
4 pores,
coloured by radius
|
4 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.24 |
3.51 |
31.3 |
0.49 |
0.20 |
7.1 |
85 |
|
3 |
0 |
2 |
8 |
2 |
1 |
0 |
|
NAD 301 B SIN 302 B
|
 |
|
2 |
 |
2.27 |
3.83 |
32.0 |
0.24 |
0.20 |
8.8 |
86 |
3 |
0 |
3 |
8 |
2 |
1 |
0 |
SIN 301 D NAD 302 D
|
|
3 |
 |
2.13 |
4.99 |
31.2 |
0.54 |
0.35 |
8.0 |
83 |
3 |
1 |
1 |
8 |
2 |
1 |
0 |
SIN 301 C NAD 302 C
|
 |
4 |
 |
2.18 |
3.61 |
57.8 |
-0.16 |
0.09 |
9.7 |
88 |
4 |
1 |
5 |
10 |
2 |
1 |
0 |
NAD 301 A SIN 302 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program