PDBsum entry 5gss Go to PDB code:  Tunnel analysis for: 5gss calculated with MOLE 2.0 PDB id 5gss Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.46 20.1 0.24 0.51 13.3 81 3 1 1 6 2 0 0   2 1.19 1.40 22.3 -0.23 0.53 8.5 79 4 0 2 3 3 0 0  GSH 210 B 3 1.16 1.16 16.2 1.88 0.56 1.3 77 0 0 3 6 1 0 0   4 1.38 1.54 15.5 -0.76 0.04 21.5 72 1 2 0 3 2 0 0   5 1.45 1.62 15.6 -0.74 0.13 20.3 72 1 2 0 3 2 0 0   6 1.17 1.17 16.4 1.89 0.55 1.3 77 0 0 3 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.