PDBsum entry 5glm Go to PDB code:  Tunnel analysis for: 5glm calculated with MOLE 2.0 PDB id 5glm Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.53 15.5 0.50 -0.03 9.8 81 1 1 1 6 1 0 0   2 1.10 1.29 19.2 0.87 0.03 4.5 87 1 0 1 6 1 1 0   3 1.13 2.12 19.1 -0.34 0.13 18.9 87 4 1 0 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.