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PDBsum entry 5fyc

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5fyc calculated with MOLE 2.0 PDB id
5fyc
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.44 84.2 -2.09 -0.37 30.6 76 12 9 2 4 5 1 0  EDO 1358 A
2 1.63 1.78 25.4 -1.16 -0.15 22.4 80 4 3 2 3 0 0 1  
3 1.40 2.36 26.7 -0.56 -0.01 16.9 71 3 2 0 4 2 0 1  
4 1.38 1.42 32.1 -1.22 -0.19 21.6 80 5 4 2 4 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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