PDBsum entry 5fty Go to PDB code:  Tunnel analysis for: 5fty calculated with MOLE 2.0 PDB id 5fty Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.39 22.3 -0.83 -0.48 9.5 89 0 1 2 2 0 0 0   2 1.29 1.29 30.5 -0.79 -0.57 9.8 91 1 2 5 3 0 0 0   3 1.50 1.50 15.2 -0.96 -0.50 15.2 85 2 1 1 2 0 1 0   4 1.49 1.49 17.6 -1.14 -0.66 15.8 91 2 2 1 2 0 0 0   5 1.46 1.46 20.4 -0.88 -0.63 12.2 90 1 2 2 2 0 1 0   6 1.18 1.18 18.1 3.08 0.92 0.6 70 0 0 1 11 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.