PDBsum entry 5fip Go to PDB code:  Tunnel analysis for: 5fip calculated with MOLE 2.0 PDB id 5fip Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.47 26.7 -0.81 -0.49 10.7 84 2 1 2 3 0 1 0  PGE 1389 A 2 1.20 1.25 71.3 -0.93 -0.24 16.2 80 11 2 3 9 0 1 0  PGE 1389 A IPA 1397 B 3 1.26 1.45 18.5 0.60 0.06 3.5 80 0 1 1 3 1 1 0   4 1.36 1.35 15.0 -0.69 -0.30 14.2 79 3 1 1 3 1 0 0   5 1.71 1.89 15.8 -0.25 0.18 10.7 82 1 3 1 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.