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PDBsum entry 5fbk

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5fbk calculated with MOLE 2.0 PDB id
5fbk
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.26 43.2 -1.06 -0.54 12.3 91 3 4 6 4 1 1 0  
2 1.61 2.79 50.6 -1.63 -0.61 19.6 85 3 6 5 3 2 1 0  CSO 482 A
3 1.38 1.48 62.7 -1.61 -0.44 20.6 83 5 4 3 2 1 0 0  NAG 603 B
4 1.67 2.66 65.5 -1.83 -0.58 19.1 85 3 9 8 4 4 0 0  
5 2.63 3.27 66.8 -2.74 -0.85 39.4 84 3 15 3 3 0 0 0  CSO 482 B
6 1.57 2.79 111.2 -2.04 -0.64 23.2 86 5 16 12 6 4 0 0  CSO 482 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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