PDBsum entry 5f8c Go to PDB code:  Tunnel analysis for: 5f8c calculated with MOLE 2.0 PDB id 5f8c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.53 33.8 -1.11 -0.23 18.4 93 4 2 2 5 1 0 0  CSD 302 B 2 1.41 1.53 34.0 -1.06 -0.16 16.6 91 3 2 2 4 1 1 0  CSD 302 B 3 1.40 1.55 34.9 -0.83 -0.14 17.3 86 2 2 3 5 2 0 0  CSD 302 B 4 1.41 1.51 42.3 0.16 0.09 12.5 88 2 6 3 9 2 0 0  CSD 302 B 5 1.45 2.44 29.4 0.84 0.28 8.8 83 0 3 2 8 3 1 0   6 1.47 2.51 30.5 0.10 0.05 7.7 80 2 2 2 6 4 0 0   7 1.45 3.34 34.1 0.49 0.37 13.1 78 2 2 2 8 3 1 0   8 1.45 2.45 34.1 0.87 0.26 6.3 82 0 3 2 10 3 0 0   9 1.46 2.46 38.6 0.31 0.30 6.9 76 0 3 3 6 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.