PDBsum entry 5f3c Go to PDB code:  Pore analysis for: 5f3c calculated with MOLE 2.0 PDB id 5f3c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.00 4.08 27.9 -1.82 -0.35 26.1 83 3 2 3 2 0 0 1   2 1.36 1.38 28.3 -1.29 -0.13 22.3 73 4 3 0 4 2 0 1   3 1.35 1.62 30.8 -1.83 -0.26 26.4 79 4 5 1 3 2 0 0  5U8 403 B 4 1.28 1.28 53.9 -2.09 -0.30 26.8 81 5 6 3 6 3 0 0  5U8 403 C 5 1.57 1.76 57.1 -1.45 -0.51 20.2 92 3 4 5 3 0 1 0   6 2.23 3.00 64.0 -0.36 -0.29 13.5 88 4 2 3 6 0 2 0   7 1.56 1.77 67.9 -0.31 -0.38 10.7 93 2 3 3 6 0 0 0   8 2.69 3.98 112.8 -1.86 -0.30 21.2 79 11 2 7 3 3 2 1   9 1.19 1.23 34.5 -1.61 -0.26 26.2 80 3 5 1 5 2 0 0  5U8 403 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.