PDBsum entry 5ezl

Pore analysis for: 5ezl calculated with

MOLE 2.0

PDB id

5ezl

Pores calculated on whole structure

Pores calculated excluding ligands

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11 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

3.18

3.34

32.3

-0.90

-0.44

14.9

76

3

2

1

2

0

2

0

2

2.73

2.88

33.8

-0.91

-0.54

13.9

81

2

2

3

3

1

3

0

3

2.54

2.68

34.2

-0.66

-0.36

7.1

75

0

2

1

2

0

4

0

4

2.19

2.19

39.4

-1.48

-0.65

15.9

88

3

3

7

3

0

1

0

5

3.19

3.36

41.1

-0.92

-0.58

12.9

80

4

3

2

3

0

2

0

6

1.59

1.65

43.8

-0.71

-0.33

9.3

72

2

3

0

2

2

5

1

7

2.18

2.64

43.9

-1.29

-0.50

12.2

91

2

4

9

2

1

0

0

8

2.17

2.17

49.6

-0.91

-0.62

11.1

88

1

2

6

4

0

2

0

9

1.97

1.97

53.7

-0.71

-0.42

10.2

80

2

2

3

4

1

4

0

10

3.15

3.44

53.5

-1.00

-0.53

10.5

89

2

3

2

1

0

3

0

11

2.11

2.27

53.9

-1.11

-0.44

15.1

77

4

3

4

4

1

5

0

12

1.68

1.68

60.2

-0.37

-0.24

11.6

80

3

1

2

5

2

1

1

13

1.49

1.54

72.5

-0.95

-0.60

13.4

92

3

4

5

2

1

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.