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PDBsum entry 5evm

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 5evm calculated with MOLE 2.0 PDB id
5evm
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.49 17.4 0.10 -0.05 2.2 90 0 0 5 3 1 1 0  NAG 1 N NAG 2 N
2 1.16 1.62 17.6 0.04 -0.06 2.2 90 0 0 5 3 1 1 0  NAG 1 L NAG 2 L MAN 3 L
3 1.16 1.16 18.3 0.60 -0.04 5.3 80 3 0 3 4 1 0 0  
4 1.10 1.42 18.8 0.64 0.03 5.1 81 2 0 3 4 1 0 0  
5 1.23 1.49 19.4 0.40 -0.13 4.2 80 3 0 3 4 1 0 0  
6 1.38 1.58 33.1 1.79 0.27 1.4 84 1 0 3 12 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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