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PDBsum entry 5evm

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Viral protein PDB id
5evm
Contents
Protein chains
(+ 0 more) 456 a.a.
Ligands
NAG-NAG-BMA-MAN-
MAN
NAG-NAG ×5
NAG-NAG-MAN ×6
NAG-NAG-MAN-MAN-
MAN
×3
NAG-NAG-MAN-MAN ×3
MLI ×6

References listed in PDB file
Key reference
Title Crystal structure of the pre-Fusion nipah virus fusion glycoprotein reveals a novel hexamer-Of-Trimers assembly.
Authors K.Xu, Y.P.Chan, B.Bradel-Tretheway, Z.Akyol-Ataman, Y.Zhu, S.Dutta, L.Yan, Y.Feng, L.F.Wang, G.Skiniotis, B.Lee, Z.H.Zhou, C.C.Broder, H.C.Aguilar, D.B.Nikolov.
Ref. Plos Pathog, 2015, 11, e1005322. [DOI no: 10.1371/journal.ppat.1005322]
PubMed id 26646856
Abstract
Nipah virus (NiV) is a paramyxovirus that infects host cells through the coordinated efforts of two envelope glycoproteins. The G glycoprotein attaches to cell receptors, triggering the fusion (F) glycoprotein to execute membrane fusion. Here we report the first crystal structure of the pre-fusion form of the NiV-F glycoprotein ectodomain. Interestingly this structure also revealed a hexamer-of-trimers encircling a central axis. Electron tomography of Nipah virus-like particles supported the hexameric pre-fusion model, and biochemical analyses supported the hexamer-of-trimers F assembly in solution. Importantly, structure-assisted site-directed mutagenesis of the interfaces between F trimers highlighted the functional relevance of the hexameric assembly. Shown here, in both cell-cell fusion and virus-cell fusion systems, our results suggested that this hexamer-of-trimers assembly was important during fusion pore formation. We propose that this assembly would stabilize the pre-fusion F conformation prior to cell attachment and facilitate the coordinated transition to a post-fusion conformation of all six F trimers upon triggering of a single trimer. Together, our data reveal a novel and functional pre-fusion architecture of a paramyxoviral fusion glycoprotein.
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