PDBsum entry 5eqe Go to PDB code:  Tunnel analysis for: 5eqe calculated with MOLE 2.0 PDB id 5eqe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.30 33.0 -1.59 -0.21 25.2 76 3 6 3 3 5 0 0  5R8 501 A 2 1.20 1.34 33.8 -1.00 -0.29 18.4 83 3 3 4 7 3 0 0   3 1.42 3.16 16.6 -2.18 -0.11 22.2 85 4 0 1 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.