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PDBsum entry 5ej5
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Pore analysis for: 5ej5 calculated with  MOLE 2.0
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PDB id
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5ej5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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28 pores,
coloured by radius |
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22 pores,
coloured by radius
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22 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.64 |
6.45 |
45.1 |
-2.19 |
-0.66 |
20.2 |
89 |
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6 |
4 |
7 |
1 |
0 |
0 |
0 |
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2 |
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3.21 |
3.37 |
51.7 |
-1.99 |
-0.81 |
21.1 |
85 |
6 |
5 |
5 |
1 |
0 |
1 |
0 |
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3 |
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3.21 |
3.38 |
54.0 |
-2.79 |
-0.81 |
27.0 |
81 |
8 |
8 |
6 |
0 |
0 |
1 |
0 |
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4 |
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3.19 |
3.42 |
55.5 |
-1.99 |
-0.68 |
20.5 |
85 |
9 |
3 |
6 |
1 |
0 |
1 |
0 |
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5 |
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3.64 |
6.47 |
71.2 |
-2.30 |
-0.81 |
19.9 |
87 |
5 |
8 |
10 |
1 |
0 |
0 |
0 |
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6 |
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1.64 |
1.63 |
74.8 |
-1.02 |
-0.55 |
16.5 |
89 |
9 |
5 |
6 |
6 |
0 |
0 |
0 |
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7 |
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1.70 |
1.70 |
82.5 |
-0.89 |
-0.41 |
20.3 |
78 |
6 |
11 |
3 |
10 |
0 |
2 |
0 |
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8 |
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1.45 |
1.71 |
105.1 |
-1.09 |
-0.37 |
19.7 |
76 |
7 |
10 |
2 |
11 |
2 |
3 |
0 |
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9 |
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1.61 |
1.82 |
114.8 |
-1.27 |
-0.56 |
17.4 |
89 |
14 |
5 |
12 |
7 |
0 |
0 |
0 |
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10 |
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1.69 |
1.69 |
115.6 |
-1.15 |
-0.58 |
19.7 |
84 |
10 |
13 |
6 |
10 |
0 |
0 |
0 |
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11 |
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1.50 |
1.71 |
118.2 |
-1.79 |
-0.63 |
15.3 |
81 |
5 |
5 |
8 |
4 |
2 |
2 |
1 |
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12 |
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1.18 |
1.66 |
120.0 |
-0.76 |
-0.33 |
15.9 |
81 |
9 |
8 |
8 |
13 |
2 |
1 |
0 |
TD6 601 E GOL 603 F
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13 |
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1.68 |
1.68 |
120.9 |
-0.71 |
-0.56 |
13.2 |
85 |
8 |
9 |
7 |
12 |
0 |
2 |
0 |
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14 |
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1.58 |
1.58 |
136.1 |
-2.25 |
-0.51 |
29.4 |
78 |
11 |
8 |
3 |
5 |
3 |
3 |
0 |
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15 |
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1.60 |
1.61 |
142.4 |
-0.74 |
-0.54 |
11.1 |
85 |
8 |
6 |
8 |
12 |
1 |
4 |
0 |
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16 |
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1.64 |
1.65 |
141.1 |
-1.36 |
-0.60 |
18.4 |
86 |
15 |
12 |
12 |
8 |
0 |
0 |
0 |
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17 |
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1.64 |
1.66 |
143.5 |
-1.28 |
-0.64 |
16.9 |
87 |
11 |
14 |
12 |
8 |
0 |
0 |
0 |
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18 |
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1.62 |
1.65 |
147.0 |
-1.03 |
-0.56 |
14.6 |
87 |
13 |
8 |
13 |
11 |
0 |
2 |
0 |
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19 |
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1.67 |
1.66 |
149.4 |
-0.89 |
-0.58 |
12.8 |
87 |
9 |
10 |
13 |
11 |
0 |
2 |
0 |
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20 |
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1.18 |
1.36 |
161.2 |
-0.46 |
-0.09 |
13.1 |
82 |
9 |
5 |
14 |
16 |
4 |
4 |
0 |
TD6 601 E GOL 603 F TD6 601 G GOL 603 H
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21 |
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1.31 |
1.58 |
173.4 |
-1.03 |
-0.44 |
15.3 |
84 |
13 |
12 |
17 |
14 |
2 |
2 |
0 |
TD6 601 G GOL 603 H
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22 |
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1.23 |
1.58 |
194.2 |
-1.12 |
-0.46 |
16.7 |
85 |
18 |
10 |
17 |
16 |
2 |
1 |
0 |
TD6 601 E GOL 603 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program