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PDBsum entry 5eeh

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5eeh calculated with MOLE 2.0 PDB id
5eeh
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.08 3.77 27.1 -0.64 -0.14 17.9 75 3 2 0 5 1 1 0  
2 1.92 2.66 27.8 -2.44 -0.82 25.3 81 2 6 2 1 0 3 0  P9P 407 A
3 1.91 2.70 29.3 -2.49 -0.76 26.6 82 1 6 2 2 0 3 0  P9P 407 A
4 1.61 1.85 31.2 0.07 0.27 10.4 67 1 3 2 3 7 0 0  SAH 402 B
5 1.64 1.93 36.4 0.05 0.18 10.6 72 2 3 3 3 6 0 0  SAH 401 A P9P 404 A
6 2.43 3.34 37.1 -1.04 -0.16 20.2 82 3 5 2 4 0 2 0  P9P 405 A P9P 406 A P9P 401 B
7 1.90 4.67 38.5 0.22 0.56 8.4 69 0 5 3 5 9 0 1  SAH 402 B P9P 404 B P9P 405 B P9P 406 B P9P 407 B
SO4 409 B
8 1.88 4.60 45.5 -0.24 0.37 10.8 64 0 5 3 4 9 0 1  SAH 401 C P9P 403 C P9P 404 C
9 2.42 3.34 45.7 -1.55 -0.35 21.2 81 3 7 4 4 1 2 0  P9P 405 A P9P 406 A P9P 401 B
10 1.90 4.53 49.7 -0.06 0.35 10.0 70 1 5 4 7 9 0 1  SAH 401 A P9P 403 A P9P 404 A P9P 405 A P9P 406 A
SO4 409 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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