PDBsum entry 5eaa Go to PDB code:  Tunnel analysis for: 5eaa calculated with MOLE 2.0 PDB id 5eaa Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.07 1.26 31.7 -1.38 -0.50 11.5 85 2 0 5 2 2 0 0  PLP 458 A 2 1.27 1.56 23.5 -1.42 -0.03 14.4 66 2 1 1 2 4 1 0   3 1.30 1.56 25.9 -0.66 0.14 11.7 66 2 1 2 3 4 1 0   4 1.19 3.19 18.2 -1.40 -0.18 30.2 70 3 1 0 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.