PDBsum entry 5e9f Go to PDB code:  Pore analysis for: 5e9f calculated with MOLE 2.0 PDB id 5e9f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.60 1.71 26.6 -1.62 -0.59 15.0 78 3 1 2 1 1 3 0   2 1.36 2.65 31.4 -1.25 -0.10 17.4 78 4 1 2 3 4 1 0   3 1.44 2.15 33.0 -1.31 -0.33 19.0 78 3 4 1 4 4 1 0   4 1.53 2.35 33.8 -1.28 -0.38 14.9 87 3 1 3 4 1 2 0   5 2.91 4.69 35.6 -2.53 -0.23 32.1 75 7 5 2 0 4 2 0   6 1.33 1.40 55.8 -0.88 -0.16 15.5 77 6 3 3 8 3 0 0   7 1.66 1.81 59.1 -2.01 -0.48 22.6 83 5 8 4 5 1 2 0   8 2.02 2.03 60.7 -1.21 -0.51 13.0 79 1 6 3 7 2 1 0   9 1.70 1.70 64.3 -1.72 -0.56 21.4 86 4 5 4 4 1 0 0   10 1.68 1.80 73.6 -1.60 -0.46 20.8 77 5 9 5 3 4 3 0   11 1.32 1.40 76.4 -0.89 -0.26 14.0 80 4 6 3 12 4 1 0   12 1.18 1.58 90.8 -1.40 -0.40 20.9 82 8 7 4 9 2 0 0   13 1.16 1.54 94.8 -1.32 -0.35 19.4 80 6 8 5 9 4 1 0   14 1.38 1.42 113.2 -0.76 -0.11 17.7 81 9 9 6 15 8 2 0   15 1.32 2.75 149.1 -1.32 -0.25 19.5 81 12 11 10 21 5 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.