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PDBsum entry 5e89

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Sugar binding protein/inhibitor PDB id
5e89
Contents
Protein chain
137 a.a.
Ligands
TD2
Metals
_CL
Waters ×162

References listed in PDB file
Key reference
Title Galectin-3-Binding glycomimetics that strongly reduce bleomycin-Induced lung fibrosis and modulate intracellular glycan recognition.
Authors T.Delaine, P.Collins, A.Mackinnon, G.Sharma, J.Stegmayr, V.K.Rajput, S.Mandal, I.Cumpstey, A.Larumbe, B.A.Salameh, B.Kahl-Knutsson, H.Van hattum, M.Van scherpenzeel, R.J.Pieters, T.Sethi, H.Schambye, S.Oredsson, H.Leffler, H.Blanchard, U.J.Nilsson.
Ref. Chembiochem, 2016, 17, 1759-1770. [DOI no: 10.1002/cbic.201600285]
PubMed id 27356186
Abstract
Discovery of glycan-competitive galectin-3-binding compounds that attenuate lung fibrosis in a murine model and that block intracellular galectin-3 accumulation at damaged vesicles, hence revealing galectin-3-glycan interactions involved in fibrosis progression and in intracellular galectin-3 activities, is reported. 3,3'-Bis-(4-aryltriazol-1-yl)thiodigalactosides were synthesized and evaluated as antagonists of galectin-1, -2, -3, and -4 N-terminal, -4 C-terminal, -7 and -8 N-terminal, -9 N-terminal, and -9 C-terminal domains. Compounds displaying low-nanomolar affinities for galectins-1 and -3 were identified in a competitive fluorescence anisotropy assay. X-ray structural analysis of selected compounds in complex with galectin-3, together with galectin-3 mutant binding experiments, revealed that both the aryltriazolyl moieties and fluoro substituents on the compounds are involved in key interactions responsible for exceptional affinities towards galectin-3. The most potent galectin-3 antagonist was demonstrated to act in an assay monitoring galectin-3 accumulation upon amitriptyline-induced vesicle damage, visualizing a biochemically/medically relevant intracellular lectin-carbohydrate binding event and that it can be blocked by a small molecule. The same antagonist administered intratracheally attenuated bleomycin-induced pulmonary fibrosis in a mouse model with a dose/response profile comparing favorably with that of oral administration of the marketed antifibrotic compound pirfenidone.
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