 |
PDBsum entry 5e7c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5e7c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5e7c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
19 pores,
coloured by radius |
|
30 pores,
coloured by radius
|
30 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.43 |
1.45 |
38.5 |
0.60 |
0.63 |
11.6 |
74 |
|
4 |
2 |
3 |
6 |
6 |
0 |
0 |
|
CLA 508 c CLA 510 c CLA 513 c
|
 |
|
2 |
 |
1.50 |
1.78 |
40.5 |
0.59 |
0.89 |
9.8 |
67 |
4 |
0 |
1 |
5 |
11 |
1 |
0 |
CLA 507 c CLA 508 c CLA 510 c CLA 513 c
|
|
3 |
 |
1.41 |
1.44 |
42.3 |
0.81 |
0.61 |
10.6 |
71 |
2 |
1 |
3 |
7 |
7 |
0 |
0 |
SQD 610 a LHG 614 a CLA 505 c CLA 509 c CLA 510 c
CLA 511 c DGD 519 c
|
|
4 |
 |
1.42 |
1.44 |
43.7 |
0.06 |
0.56 |
10.2 |
72 |
4 |
2 |
3 |
6 |
7 |
1 |
0 |
CLA 507 c CLA 508 c CLA 510 c
|
|
5 |
 |
2.35 |
2.87 |
45.0 |
1.78 |
0.66 |
8.9 |
76 |
4 |
0 |
0 |
16 |
4 |
0 |
1 |
CLA 603 B CLA 604 B CLA 605 B CLA 606 B CLA 610 B
CLA 611 B CLA 613 B CLA 614 B CLA 616 B CLA 617 B
BCR 101 H
|
|
6 |
 |
1.40 |
1.68 |
47.4 |
2.31 |
1.01 |
8.1 |
76 |
3 |
0 |
0 |
11 |
4 |
0 |
0 |
CLA 502 C CLA 503 C CLA 509 C CLA 510 C CLA 512 C
CLA 513 C BCR 514 C
|
|
7 |
 |
2.58 |
5.36 |
56.7 |
2.32 |
0.93 |
4.4 |
76 |
2 |
0 |
1 |
21 |
9 |
1 |
0 |
CLA 605 A CLA 606 A PHO 607 A CLA 402 D CLA 403 D
PL9 405 D LHG 407 D LHG 101 L BCR 101 T SQD 601 b
|
|
8 |
 |
2.06 |
3.20 |
58.7 |
2.11 |
0.75 |
1.9 |
81 |
2 |
0 |
2 |
21 |
6 |
1 |
0 |
CLA 504 C CLA 508 C CLA 509 C CLA 510 C CLA 511 C
BCR 521 C LHG 408 D BCR 101 K
|
|
9 |
 |
1.90 |
2.03 |
60.7 |
1.32 |
0.87 |
11.7 |
68 |
5 |
0 |
1 |
12 |
10 |
0 |
0 |
SQD 610 a LHG 614 a CLA 504 c CLA 505 c CLA 508 c
CLA 509 c CLA 510 c CLA 511 c CLA 513 c CLA 514 c
BCR 515 c DGD 519 c
|
|
10 |
 |
2.37 |
2.89 |
63.7 |
0.64 |
0.52 |
7.0 |
76 |
4 |
1 |
6 |
12 |
12 |
0 |
0 |
CLA 603 B CLA 604 B CLA 609 B CLA 610 B CLA 611 B
BCR 101 H DGD 102 H
|
|
11 |
 |
2.83 |
3.83 |
63.5 |
1.20 |
0.73 |
8.9 |
67 |
5 |
0 |
2 |
11 |
10 |
0 |
0 |
SQD 610 a LHG 614 a CLA 502 c CLA 505 c CLA 507 c
CLA 508 c CLA 509 c CLA 510 c CLA 511 c BCR 516 c
DGD 519 c
|
|
12 |
|
2.42 |
2.47 |
70.9 |
0.15 |
0.36 |
12.5 |
81 |
7 |
1 |
5 |
15 |
5 |
1 |
1 |
CLA 603 B CLA 604 B CLA 605 B CLA 606 B CLA 611 B
CLA 613 B CLA 614 B CLA 616 B CLA 617 B DGD 102 H
|
|
13 |
|
2.11 |
4.05 |
73.0 |
2.47 |
1.12 |
2.5 |
76 |
2 |
0 |
0 |
18 |
11 |
0 |
0 |
CLA 605 a SQD 610 a LHG 614 a CLA 505 c CLA 509 c
CLA 511 c DGD 518 c DGD 519 c LMG 520 c LHG 101 e
HEM 102 e BCR 101 f LMG 101 j
|
|
14 |
|
2.81 |
5.51 |
74.0 |
2.59 |
0.99 |
2.8 |
72 |
2 |
0 |
1 |
23 |
13 |
2 |
0 |
CLA 604 a CLA 605 a PHO 606 a PL9 609 a SQD 612 a
CLA 613 a PHO 401 d CLA 402 d PL9 404 d LHG 406 d
LHG 101 l BCR 101 t
|
|
15 |
|
1.41 |
1.68 |
80.2 |
1.84 |
0.93 |
4.7 |
75 |
3 |
0 |
1 |
16 |
8 |
0 |
0 |
CLA 502 C CLA 503 C CLA 504 C CLA 509 C CLA 510 C
CLA 512 C CLA 513 C BCR 514 C DGD 517 C DGD 518 C
LMG 519 C
|
|
16 |
|
2.16 |
3.95 |
83.2 |
2.41 |
0.97 |
4.3 |
71 |
2 |
0 |
0 |
19 |
9 |
1 |
0 |
CLA 607 B BCR 619 B CLA 607 a BCR 608 a LMG 611 a
SQD 612 a CLA 502 c CLA 506 c CLA 507 c CLA 508 c
BCR 516 c DGD 517 c
|
|
17 |
|
2.13 |
3.96 |
87.2 |
0.57 |
0.29 |
11.4 |
75 |
3 |
3 |
1 |
15 |
5 |
1 |
0 |
CLA 607 B BCR 619 B CLA 607 a BCR 608 a LMG 611 a
SQD 612 a CLA 506 c DGD 517 c
|
|
18 |
|
2.02 |
3.27 |
90.2 |
2.32 |
0.80 |
1.6 |
80 |
2 |
0 |
2 |
28 |
9 |
1 |
0 |
CLA 504 C CLA 508 C CLA 509 C CLA 510 C CLA 511 C
DGD 517 C DGD 518 C LMG 519 C BCR 521 C LHG 408 D
BCR 101 K
|
|
19 |
|
2.30 |
4.60 |
95.0 |
2.31 |
0.80 |
1.6 |
70 |
2 |
0 |
2 |
24 |
15 |
1 |
0 |
CLA 605 A PHO 607 A CLA 605 B CLA 608 B CLA 612 B
CLA 614 B CLA 615 B BCR 618 B BCR 619 B LMG 621 B
LHG 622 B SQD 623 B CLA 402 D PL9 405 D LHG 407 D
LHG 101 L BCR 101 T SQD 601 b BCR 101 t
|
|
20 |
|
2.25 |
4.22 |
109.4 |
2.10 |
0.80 |
3.6 |
76 |
4 |
0 |
3 |
33 |
17 |
2 |
0 |
CLA 605 A CLA 606 A PHO 607 A CLA 605 B CLA 608 B
CLA 612 B CLA 614 B CLA 615 B BCR 618 B BCR 619 B
LMG 621 B LHG 622 B SQD 623 B CLA 402 D CLA 403 D
PL9 405 D LHG 407 D LHG 101 L BCR 101 t
|
|
21 |
|
1.40 |
1.46 |
109.7 |
0.07 |
0.22 |
11.7 |
77 |
6 |
5 |
4 |
14 |
7 |
1 |
0 |
CLA 607 a LMG 611 a CLA 502 c CLA 506 c CLA 507 c
CLA 508 c CLA 510 c BCR 516 c DGD 517 c
|
|
22 |
|
2.27 |
4.57 |
111.5 |
2.06 |
0.84 |
5.9 |
73 |
6 |
0 |
0 |
31 |
15 |
1 |
1 |
CLA 605 A PHO 607 A CLA 603 B CLA 604 B CLA 605 B
CLA 606 B CLA 607 B CLA 608 B CLA 610 B CLA 611 B
CLA 612 B CLA 613 B CLA 614 B CLA 615 B BCR 618 B
BCR 619 B LMG 621 B LHG 622 B CLA 402 D PL9 405 D
LHG 407 D BCR 101 H LHG 101 L BCR 101 T SQD 601 b
|
|
23 |
|
2.12 |
3.91 |
119.7 |
2.33 |
0.95 |
3.0 |
78 |
4 |
0 |
2 |
32 |
15 |
2 |
0 |
CLA 604 a CLA 605 a PHO 606 a SQD 612 a CLA 613 a
LHG 614 a DGD 518 c DGD 519 c CLA 402 d PL9 404 d
LHG 406 d LHG 101 e HEM 102 e BCR 101 f LMG 101 j
LHG 101 l BCR 101 t
|
|
24 |
|
1.52 |
1.77 |
119.2 |
0.76 |
0.39 |
11.0 |
77 |
5 |
3 |
2 |
20 |
8 |
1 |
0 |
CLA 607 a LMG 611 a CLA 502 c CLA 504 c CLA 506 c
CLA 507 c CLA 508 c CLA 510 c CLA 513 c CLA 514 c
BCR 515 c BCR 516 c DGD 517 c
|
|
25 |
|
2.33 |
4.35 |
123.7 |
1.98 |
0.81 |
5.5 |
70 |
6 |
0 |
1 |
33 |
17 |
1 |
1 |
CLA 604 a PHO 606 a SQD 612 a CLA 613 a CLA 605 b
CLA 606 b CLA 607 b CLA 608 b CLA 609 b CLA 610 b
CLA 611 b CLA 612 b CLA 613 b CLA 614 b CLA 615 b
CLA 616 b CLA 617 b BCR 620 b BCR 621 b LMG 623 b
LHG 624 b PL9 404 d LHG 406 d BCR 101 h LHG 101 l
BCR 101 t
|
|
26 |
|
2.92 |
2.94 |
126.3 |
0.61 |
0.58 |
12.3 |
72 |
6 |
3 |
1 |
19 |
12 |
2 |
0 |
CLA 607 a SQD 610 a LMG 611 a LHG 614 a CLA 502 c
CLA 503 c CLA 504 c CLA 505 c CLA 506 c CLA 507 c
CLA 508 c CLA 509 c CLA 510 c CLA 511 c BCR 516 c
DGD 517 c DGD 519 c LMG 520 c
|
|
27 |
|
2.14 |
4.52 |
129.1 |
2.32 |
0.86 |
2.6 |
72 |
4 |
0 |
3 |
37 |
20 |
3 |
0 |
BCR 101 T CLA 604 a CLA 605 a PHO 606 a PL9 609 a
CLA 613 a SQD 601 b SQD 602 b CLA 607 b CLA 610 b
CLA 614 b CLA 616 b CLA 617 b BCR 620 b BCR 621 b
LMG 623 b LHG 624 b PHO 401 d CLA 402 d PL9 404 d
LHG 406 d LHG 101 l
|
|
28 |
|
1.71 |
1.91 |
142.9 |
-1.35 |
-0.41 |
18.1 |
79 |
9 |
11 |
4 |
7 |
3 |
6 |
1 |
LMG 611 a HEM 201 v
|
|
29 |
|
2.37 |
4.41 |
148.1 |
1.12 |
0.65 |
9.1 |
77 |
11 |
1 |
6 |
36 |
20 |
3 |
0 |
CLA 605 A CLA 606 A PHO 607 A CLA 603 B CLA 604 B
CLA 605 B CLA 606 B CLA 608 B CLA 611 B CLA 612 B
CLA 613 B CLA 614 B CLA 615 B BCR 618 B BCR 619 B
LMG 621 B LHG 622 B CLA 402 D CLA 403 D PL9 405 D
LHG 407 D DGD 102 H LHG 101 L
|
 |
30 |
|
2.32 |
2.90 |
195.7 |
0.81 |
0.50 |
7.9 |
74 |
12 |
2 |
5 |
42 |
22 |
2 |
2 |
CLA 603 B CLA 604 B CLA 605 B CLA 606 B CLA 607 B
CLA 608 B CLA 610 B CLA 611 B CLA 612 B CLA 613 B
CLA 614 B CLA 615 B BCR 618 B BCR 619 B LMG 621 B
LHG 622 B BCR 101 H LHG 101 L BCR 101 T CLA 605 b
CLA 606 b CLA 607 b CLA 608 b CLA 609 b CLA 610 b
CLA 611 b CLA 612 b CLA 613 b CLA 614 b CLA 615 b
CLA 616 b CLA 617 b BCR 620 b BCR 621 b LMG 623 b
LHG 624 b BCR 101 h LHG 101 l BCR 101 t
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program