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PDBsum entry 5e6f

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 5e6f calculated with MOLE 2.0 PDB id
5e6f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 1.64 17.7 -2.32 -0.55 26.0 77 2 2 2 0 2 1 0  
2 1.48 1.61 17.9 -2.07 -0.55 20.6 82 1 2 4 0 2 1 0  
3 1.59 1.71 15.5 -2.47 -0.60 30.8 70 2 2 0 1 2 1 0  
4 1.48 1.48 17.1 -2.12 -0.60 20.9 78 0 2 3 1 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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