PDBsum entry 5e6e Go to PDB code:  Tunnel analysis for: 5e6e calculated with MOLE 2.0 PDB id 5e6e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 2.66 19.0 -0.96 0.36 23.2 73 5 1 0 5 2 0 1   2 1.39 1.69 20.5 2.14 0.72 3.8 72 2 0 1 7 4 0 0  CMO 201 B HEM 202 B 3 1.22 2.67 21.4 -0.56 0.30 15.3 77 4 0 1 3 2 0 1   4 1.34 1.68 23.1 1.63 0.66 10.5 72 2 0 1 6 3 0 0  CMO 201 B HEM 202 B 5 1.18 1.16 54.5 0.36 0.31 12.8 73 5 1 2 12 6 0 0  CMO 201 B HEM 202 B 6 1.27 1.96 30.9 2.07 0.59 5.5 68 1 1 0 11 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.