PDBsum entry 5e5r Go to PDB code:  Tunnel analysis for: 5e5r calculated with MOLE 2.0 PDB id 5e5r Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 2.90 16.1 1.37 0.69 3.0 77 1 0 0 6 2 0 0   2 1.21 2.89 28.1 -0.09 0.17 8.4 85 1 1 2 6 3 0 0   3 1.22 2.89 32.0 -0.48 0.27 14.7 81 4 1 0 5 3 0 0   4 1.22 1.44 15.4 -2.02 -0.29 19.9 81 4 2 2 0 2 0 0   5 1.27 1.50 20.4 0.99 0.41 6.3 77 1 1 1 5 2 1 0   6 1.26 1.63 23.6 -0.62 -0.21 12.5 71 3 0 0 3 1 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.