PDBsum entry 5e4z Go to PDB code:  Tunnel analysis for: 5e4z calculated with MOLE 2.0 PDB id 5e4z Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 1.63 19.2 -0.76 -0.10 14.3 88 1 2 2 2 2 0 0  PLP 404 A 2 1.52 1.63 19.7 -1.35 -0.15 17.0 84 2 2 1 0 2 0 0  PLP 404 A 3 1.52 1.60 39.3 -0.92 -0.41 13.1 84 3 4 2 3 2 1 0  PLP 404 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.