PDBsum entry 5e4h Go to PDB code:  Tunnel analysis for: 5e4h calculated with MOLE 2.0 PDB id 5e4h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.37 39.8 0.16 -0.23 4.0 91 2 0 5 7 1 0 0  TPO 612 A 2 1.22 1.40 45.2 -0.31 -0.26 9.3 90 4 0 4 7 1 0 0   3 1.23 1.39 48.5 -0.13 -0.25 6.2 88 4 0 4 6 1 2 0  TPO 612 A 4 1.19 1.37 35.8 -0.04 -0.18 5.2 88 3 0 5 5 2 0 0   5 1.20 1.38 35.7 -0.04 -0.18 5.2 88 3 0 5 5 2 0 0   6 1.21 1.38 22.3 -0.08 -0.20 6.9 89 4 0 3 3 1 0 0   7 1.21 1.38 23.1 0.06 -0.16 6.8 89 4 0 3 3 1 0 0   8 1.56 2.45 17.2 -3.02 -0.57 35.3 77 3 2 1 0 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.