PDBsum entry 5dxh

Pore analysis for: 5dxh calculated with

MOLE 2.0

PDB id

5dxh

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

10 pores, coloured by radius

10 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.62

1.68

28.5

-2.57

-0.49

18.5

81

3

2

6

0

2

4

0

2

1.58

1.58

64.4

-1.18

-0.46

11.5

80

4

6

7

6

2

4

0

3

1.60

1.58

65.1

-1.09

-0.37

11.5

79

6

5

4

4

3

6

1

4

1.30

1.36

66.3

-1.66

-0.58

18.8

80

2

8

6

3

2

3

0

5

2.18

2.53

85.6

-1.64

-0.41

20.0

88

6

4

9

8

2

1

1

6

1.83

3.60

91.3

-1.63

-0.36

15.4

88

6

4

14

11

3

1

0

7

1.62

1.80

92.4

-1.17

-0.18

19.0

81

7

6

5

8

2

2

1

8

1.51

2.74

110.1

-1.60

-0.44

21.8

83

11

11

8

8

2

4

1

9

1.30

1.37

144.0

-2.12

-0.65

26.2

86

10

15

7

4

1

3

0

10

1.18

1.19

311.8

-1.39

-0.39

21.0

84

23

22

15

19

3

5

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.