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PDBsum entry 5dp6
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Pore analysis for: 5dp6 calculated with  MOLE 2.0
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PDB id
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5dp6
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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18 pores,
coloured by radius
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18 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.77 |
1.96 |
29.7 |
-0.78 |
-0.27 |
13.0 |
80 |
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5 |
1 |
5 |
2 |
2 |
0 |
0 |
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2 |
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2.09 |
2.11 |
31.7 |
-0.53 |
-0.33 |
11.1 |
75 |
3 |
0 |
3 |
4 |
1 |
2 |
1 |
5EB 201 A
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3 |
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1.23 |
1.39 |
34.5 |
-1.61 |
-0.62 |
16.1 |
84 |
2 |
2 |
3 |
1 |
0 |
3 |
0 |
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4 |
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2.10 |
2.15 |
38.1 |
-1.39 |
-0.35 |
20.8 |
80 |
7 |
0 |
3 |
1 |
1 |
2 |
1 |
5EB 201 A
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5 |
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3.02 |
4.08 |
40.0 |
-2.71 |
-0.22 |
34.8 |
80 |
8 |
0 |
2 |
2 |
0 |
4 |
0 |
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6 |
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2.06 |
2.11 |
40.3 |
-1.12 |
-0.41 |
17.6 |
83 |
7 |
0 |
3 |
2 |
0 |
2 |
1 |
5EB 201 A
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7 |
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1.81 |
1.98 |
41.9 |
-0.74 |
-0.33 |
11.4 |
77 |
4 |
1 |
5 |
4 |
2 |
2 |
1 |
5EB 201 B
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8 |
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2.02 |
2.10 |
45.8 |
-1.31 |
-0.43 |
19.2 |
81 |
9 |
1 |
3 |
2 |
0 |
2 |
2 |
5EB 201 B
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9 |
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1.91 |
2.08 |
45.8 |
-1.15 |
-0.44 |
17.4 |
83 |
8 |
1 |
3 |
2 |
0 |
2 |
1 |
5EB 201 B
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10 |
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2.08 |
2.09 |
47.9 |
-0.51 |
-0.30 |
11.4 |
80 |
8 |
0 |
4 |
4 |
1 |
2 |
1 |
5EB 201 A
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11 |
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2.10 |
2.22 |
50.6 |
-1.35 |
-0.43 |
18.4 |
82 |
12 |
0 |
3 |
2 |
0 |
2 |
2 |
5EB 201 A
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12 |
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2.06 |
2.12 |
51.4 |
-1.41 |
-0.41 |
19.3 |
84 |
11 |
0 |
3 |
2 |
0 |
2 |
1 |
5EB 201 A
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13 |
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1.94 |
2.09 |
56.5 |
-1.50 |
-0.39 |
20.5 |
83 |
12 |
1 |
3 |
2 |
0 |
2 |
1 |
5EB 201 B
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14 |
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2.05 |
2.11 |
56.5 |
-1.50 |
-0.39 |
20.6 |
82 |
13 |
1 |
3 |
2 |
0 |
2 |
2 |
5EB 201 B
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15 |
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1.82 |
2.00 |
57.5 |
-0.87 |
-0.30 |
13.0 |
80 |
9 |
1 |
6 |
4 |
2 |
2 |
1 |
5EB 201 B
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16 |
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2.03 |
2.10 |
70.5 |
-0.59 |
-0.37 |
12.7 |
82 |
13 |
1 |
5 |
6 |
1 |
1 |
3 |
5EB 201 A 5EB 201 B
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17 |
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1.92 |
2.07 |
70.4 |
-0.60 |
-0.38 |
12.6 |
83 |
12 |
1 |
5 |
6 |
1 |
1 |
2 |
5EB 201 A 5EB 201 B
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18 |
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1.87 |
2.04 |
71.4 |
-0.25 |
-0.31 |
8.7 |
81 |
9 |
1 |
8 |
8 |
3 |
1 |
2 |
5EB 201 A 5EB 201 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program