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PDBsum entry 5dp2
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Tunnel analysis for: 5dp2 calculated with  MOLE 2.0
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PDB id
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5dp2
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.35 |
26.4 |
0.99 |
0.21 |
6.2 |
89 |
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3 |
0 |
2 |
6 |
2 |
0 |
0 |
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NAP 401 A
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2 |
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1.79 |
1.78 |
16.1 |
-1.45 |
-0.43 |
19.2 |
81 |
4 |
2 |
1 |
1 |
1 |
0 |
0 |
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3 |
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1.15 |
1.15 |
16.7 |
-1.49 |
-0.37 |
19.8 |
81 |
3 |
2 |
1 |
1 |
1 |
0 |
0 |
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4 |
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1.73 |
3.22 |
18.8 |
-0.83 |
0.00 |
1.9 |
76 |
0 |
0 |
2 |
2 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program