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PDBsum entry 5dg3
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Pore analysis for: 5dg3 calculated with  MOLE 2.0
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PDB id
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5dg3
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.94 |
3.08 |
33.5 |
-1.68 |
-0.46 |
24.4 |
84 |
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4 |
9 |
2 |
4 |
2 |
1 |
0 |
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2 |
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1.36 |
1.59 |
42.9 |
-2.53 |
-0.28 |
32.9 |
83 |
10 |
6 |
1 |
4 |
2 |
1 |
0 |
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3 |
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1.33 |
1.60 |
51.9 |
-1.95 |
-0.42 |
26.5 |
85 |
10 |
6 |
2 |
3 |
2 |
1 |
0 |
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4 |
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3.02 |
3.37 |
53.9 |
-2.13 |
-0.59 |
29.3 |
86 |
6 |
9 |
2 |
2 |
0 |
0 |
0 |
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5 |
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2.67 |
3.52 |
63.0 |
-2.02 |
-0.31 |
30.2 |
86 |
11 |
7 |
1 |
5 |
1 |
0 |
0 |
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6 |
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2.35 |
2.65 |
65.4 |
-1.11 |
0.04 |
17.9 |
80 |
7 |
3 |
3 |
8 |
1 |
3 |
0 |
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7 |
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1.98 |
2.01 |
76.8 |
-2.07 |
-0.35 |
25.5 |
75 |
10 |
5 |
4 |
1 |
4 |
3 |
0 |
U21 301 B
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8 |
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2.13 |
2.34 |
82.5 |
-1.16 |
-0.27 |
19.1 |
84 |
7 |
4 |
2 |
8 |
1 |
1 |
0 |
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9 |
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2.01 |
2.00 |
98.9 |
-2.33 |
-0.43 |
28.6 |
74 |
13 |
5 |
3 |
1 |
5 |
3 |
1 |
U21 301 B U21 301 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program