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PDBsum entry 5dcc

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protein ligands Protein-protein interface(s) links
Transferase PDB id
5dcc

 

 

 

 

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Contents
Protein chains
352 a.a.
Ligands
58U ×2
SO4 ×9
PEG ×9
PGE ×7
GOL ×4
EDO ×2
Waters ×409
PDB id:
5dcc
Name: Transferase
Title: X-ray crystal structure of a tebipenem adduct of l,d transpeptidase 2 from mycobacterium tuberculosis
Structure: L,d-transpeptidase 2. Chain: a, b. Fragment: unp residues 56-408. Synonym: ldt 2,ldt(mt2). Engineered: yes
Source: Mycobacterium tuberculosis. Organism_taxid: 83331. Strain: cdc 1551 / oshkosh. Gene: ldtb, mt2594, v735_02606. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.45Å     R-factor:   0.173     R-free:   0.214
Authors: Y.Pan,L.Basta,G.Lamichhane,M.A.Bianchet
Key ref: M.A.Bianchet et al. (2017). Structural insight into the inactivation of Mycobacterium tuberculosis non-classical transpeptidase LdtMt2by biapenem and tebipenem. BMC Biochem, 18, 8. PubMed id: 28545389
Date:
23-Aug-15     Release date:   28-Sep-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
I6Y9J2  (LDT2_MYCTU) -  L,D-transpeptidase 2 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Seq:
Struc:
408 a.a.
352 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.3.2.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
BMC Biochem 18:8 (2017)
PubMed id: 28545389  
 
 
Structural insight into the inactivation of Mycobacterium tuberculosis non-classical transpeptidase LdtMt2by biapenem and tebipenem.
M.A.Bianchet, Y.H.Pan, L.A.B.Basta, H.Saavedra, E.P.Lloyd, P.Kumar, R.Mattoo, C.A.Townsend, G.Lamichhane.
 
  ABSTRACT  
 
No abstract given.

 

 

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