PDBsum entry 5cnp Go to PDB code:  Pore analysis for: 5cnp calculated with MOLE 2.0 PDB id 5cnp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.52 27.7 -0.48 0.16 9.1 72 1 2 2 3 4 0 0  MSE 28 D 2 1.27 1.51 30.3 -0.93 -0.17 13.6 78 3 1 3 2 3 0 0  MSE 28 D 3 2.99 4.82 32.8 -0.36 0.04 7.3 85 2 0 4 3 2 0 0   4 1.47 1.54 37.9 -1.14 -0.27 10.1 84 2 1 6 3 4 0 0   5 1.31 1.32 30.1 -0.28 0.20 13.3 85 0 4 4 4 2 0 0  MSE 28 A 6 1.36 1.36 41.4 -0.40 -0.02 13.8 81 0 6 4 3 4 0 0  MSE 28 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.