spacer
spacer

PDBsum entry 5cin

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5cin calculated with MOLE 2.0 PDB id
5cin
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.05 2.20 29.1 0.51 0.20 6.6 71 0 1 0 4 1 3 0  
2 1.67 1.67 29.1 -1.27 -0.83 14.1 90 2 3 1 0 0 1 0  
3 2.01 3.29 54.0 -1.19 -0.45 19.3 79 3 4 2 6 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer