PDBsum entry 5cgi Go to PDB code:  Pore analysis for: 5cgi calculated with MOLE 2.0 PDB id 5cgi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.24 67.3 -0.65 -0.21 11.5 74 7 2 5 8 6 2 0   2 1.54 1.71 82.0 -2.07 -0.50 25.0 77 8 8 5 2 5 2 0   3 1.33 1.42 105.8 -1.50 -0.30 19.5 74 14 5 4 6 7 1 0   4 1.27 1.37 130.0 -1.49 -0.31 19.2 81 13 7 11 12 5 1 0   5 1.31 1.51 137.8 -1.66 -0.33 19.7 77 17 3 9 7 8 2 0   6 1.37 1.55 141.5 -1.46 -0.29 19.3 77 18 4 6 10 5 3 0   7 1.36 1.50 141.3 -1.19 -0.19 17.0 75 17 7 8 10 10 2 0   8 1.36 1.53 151.9 -1.40 -0.32 17.8 76 12 15 9 6 10 5 0   9 1.36 1.50 153.1 -1.36 -0.31 17.2 77 19 5 7 11 7 3 0   10 1.43 2.24 168.6 -1.16 -0.19 15.9 75 20 6 9 14 10 4 0   11 1.43 1.57 184.3 -1.78 -0.39 22.5 79 18 19 13 5 8 5 0   12 1.73 2.32 184.0 -1.40 -0.26 19.3 77 19 11 11 11 12 3 1   13 1.93 2.16 194.7 -1.77 -0.32 21.7 77 23 12 9 7 11 3 0   14 1.26 1.38 206.6 -1.62 -0.31 20.1 78 19 13 13 10 10 3 0   15 1.29 1.28 203.3 -1.55 -0.32 17.8 81 20 4 14 12 7 1 1   16 1.24 1.22 204.4 -1.64 -0.30 19.4 82 18 7 15 9 10 2 0   17 1.83 1.89 203.1 -2.37 -0.42 24.7 81 21 10 12 5 10 1 0   18 1.36 1.38 209.5 -1.98 -0.41 21.3 80 23 5 11 8 7 1 0   19 1.21 1.56 219.8 -1.83 -0.35 20.8 82 23 3 15 8 8 2 0   20 1.21 1.56 219.8 -1.83 -0.39 20.0 82 20 7 15 13 6 1 0   21 1.19 1.36 220.4 -1.57 -0.28 18.8 80 21 8 14 11 10 2 0   22 1.35 1.29 229.4 -2.08 -0.38 22.3 84 21 12 19 12 8 1 0   23 1.29 1.26 234.5 -1.84 -0.40 20.3 84 22 8 18 14 5 1 0   24 1.66 1.96 277.0 -1.91 -0.35 21.5 80 27 12 15 8 12 3 0   25 1.32 1.67 286.8 -1.44 -0.28 18.2 80 26 10 18 14 11 4 0   26 1.68 1.95 292.8 -1.74 -0.30 20.6 80 26 11 17 11 11 6 0   27 1.80 1.94 292.4 -1.57 -0.23 19.3 80 25 14 19 11 15 4 0   28 1.31 1.44 293.1 -1.82 -0.31 21.3 81 27 10 19 8 13 4 0   29 1.58 3.00 304.2 -1.68 -0.32 19.3 81 29 12 18 13 12 5 0   30 1.47 1.44 303.4 -1.83 -0.35 20.8 83 27 14 23 15 10 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.