PDBsum entry 5cc7 Go to PDB code:  Tunnel analysis for: 5cc7 calculated with MOLE 2.0 PDB id 5cc7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.70 1.70 25.7 0.20 0.14 6.4 80 1 1 3 4 2 1 0  1F1 802 A 2 1.46 1.50 27.9 -0.01 0.10 5.9 80 1 1 3 4 2 1 0  1F1 802 A 3 1.62 1.70 18.4 -0.79 0.13 26.2 81 2 3 0 1 1 0 0   4 1.14 2.12 15.9 2.44 0.56 1.9 83 1 0 0 8 0 0 1   5 1.09 2.81 18.0 -0.40 0.45 11.0 64 1 2 1 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.