PDBsum entry 5c6f Go to PDB code:  Tunnel analysis for: 5c6f calculated with MOLE 2.0 PDB id 5c6f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.32 18.3 -2.20 -0.47 31.0 76 3 4 1 3 1 0 0   2 1.22 1.46 19.3 0.54 0.07 5.4 88 1 0 5 4 1 2 0   3 1.03 1.31 19.4 -0.92 -0.50 11.1 97 0 3 3 4 0 0 0   4 1.28 1.34 15.6 -0.23 -0.25 7.2 86 2 0 2 4 1 1 0   5 1.22 2.69 21.0 -0.43 -0.36 5.6 85 0 1 1 4 0 0 0   6 1.36 1.54 22.7 -0.19 -0.25 4.8 87 0 1 1 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.