PDBsum entry 5byh Go to PDB code:  Pore analysis for: 5byh calculated with MOLE 2.0 PDB id 5byh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 1.58 49.5 -0.13 -0.34 6.5 93 0 2 4 7 2 0 0   2 1.47 2.14 52.3 0.25 -0.13 10.8 84 3 4 3 8 0 1 0   3 1.46 1.56 95.7 -1.73 -0.57 24.3 86 9 12 6 6 2 1 0   4 1.68 1.83 112.5 -0.79 -0.23 17.9 83 10 10 4 13 1 0 0   5 1.32 1.46 126.4 -0.92 -0.29 14.8 81 5 13 4 15 3 8 0   6 2.39 2.39 131.8 -1.40 -0.51 19.3 82 12 10 8 8 3 2 2   7 1.39 2.95 135.4 -0.48 -0.06 20.5 86 10 10 5 17 1 1 1   8 1.26 2.58 138.7 -0.97 -0.30 15.9 82 7 15 6 21 4 7 0   9 1.32 1.42 150.1 -0.83 -0.32 14.8 86 6 12 11 14 4 7 0   10 2.55 3.18 150.2 -1.20 -0.45 14.1 82 16 9 7 8 6 2 0   11 1.29 2.11 162.3 -0.85 -0.32 15.5 86 8 12 13 20 4 6 0   12 1.60 1.71 158.4 -0.29 -0.25 11.1 83 12 9 9 26 4 4 1   13 1.69 1.83 161.7 -0.80 -0.36 13.7 82 15 9 6 17 5 2 0   14 1.35 1.51 162.3 -1.28 -0.44 20.3 83 10 17 8 9 5 7 0   15 1.40 1.42 172.0 -0.75 -0.25 12.0 84 14 10 10 21 5 4 0   16 1.18 1.18 183.4 -0.27 -0.13 11.2 84 11 10 9 30 4 4 0   17 1.45 2.44 191.8 -0.11 -0.18 9.4 86 10 7 11 30 3 3 2   18 1.45 2.44 206.7 0.14 -0.10 9.4 87 10 10 9 31 3 5 2   19 1.27 4.12 200.1 -1.08 -0.38 13.2 83 11 14 15 15 10 3 0   20 1.35 4.14 211.5 -0.72 -0.28 12.5 83 11 14 14 24 9 3 0   21 1.21 2.46 212.1 -0.90 -0.40 15.0 86 11 16 12 19 1 5 2   22 1.85 2.02 210.2 -1.29 -0.50 18.6 83 16 17 13 16 2 3 2  MSE 236 M 23 1.47 2.32 231.4 -0.87 -0.38 14.8 85 21 13 13 21 3 4 2   24 1.40 1.49 235.7 -1.41 -0.45 17.1 83 19 23 14 15 6 9 0   25 1.32 1.44 237.7 -0.59 -0.25 15.3 82 14 17 11 25 5 9 2   26 1.34 1.42 247.1 -1.09 -0.37 16.4 83 17 23 14 24 5 9 0   27 1.49 2.28 255.0 -0.43 -0.25 13.4 85 14 14 16 26 7 2 2   28 1.15 1.17 268.5 -0.54 -0.24 11.6 84 14 14 18 33 5 7 2   29 1.47 1.45 290.0 -1.39 -0.56 17.0 84 24 25 21 16 9 5 2   30 1.26 1.38 337.3 -1.50 -0.53 17.9 84 27 32 25 23 8 11 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.