PDBsum entry 5bpy Go to PDB code:  Pore analysis for: 5bpy calculated with MOLE 2.0 PDB id 5bpy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.86 4.09 26.5 -1.91 -0.69 21.7 83 1 3 3 2 0 0 0  4UQ 4000 B 2 1.23 1.23 32.1 0.36 -0.16 5.3 77 1 1 2 8 1 0 1  4UQ 4000 A 3 1.31 1.51 52.0 -0.12 -0.21 10.1 84 3 1 5 8 1 0 0  4UQ 4000 B 4 1.31 1.52 68.1 -0.82 -0.27 16.9 77 6 5 3 10 2 0 1  4UQ 4000 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.