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PDBsum entry 5b58

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 5b58 calculated with MOLE 2.0 PDB id
5b58
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.60 69.5 0.74 0.09 3.4 88 0 1 8 14 3 3 0  
2 1.17 1.41 75.4 0.74 0.02 3.7 93 0 2 8 16 3 1 0  
3 1.29 1.50 81.9 0.16 0.04 8.6 84 3 1 8 16 2 3 0  
4 1.32 2.35 83.1 0.01 -0.05 6.7 85 1 2 8 15 2 3 0  
5 1.29 1.50 84.0 0.28 0.06 6.8 85 3 2 8 15 2 2 0  
6 1.19 1.18 85.7 0.71 -0.02 3.6 92 1 1 7 18 3 2 0  
7 1.20 1.26 20.4 1.43 -0.02 1.4 91 0 0 0 11 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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