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PDBsum entry 5aw2

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Pore analysis for: 5aw2 calculated with MOLE 2.0 PDB id
5aw2
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.21 5.81 37.4 -2.91 -0.41 37.0 75 7 7 1 3 2 1 0  
2 2.22 5.83 39.2 -2.79 -0.37 34.1 76 7 8 1 3 2 1 0  
3 1.32 1.33 39.3 -0.30 -0.39 9.2 82 2 1 3 6 1 1 1  
4 2.71 3.72 39.4 -2.59 -0.59 35.9 85 7 3 1 1 0 0 0  
5 1.26 1.42 41.2 -1.21 -0.14 23.9 83 6 4 3 2 0 2 0  
6 1.63 1.80 41.7 -3.13 -0.63 36.8 75 7 5 1 0 1 0 0  
7 1.33 1.33 53.0 -0.94 -0.43 16.1 81 6 2 4 4 2 1 1  
8 1.31 1.44 53.5 -1.47 -0.22 22.3 82 7 4 4 3 1 2 0  
9 1.26 1.42 58.6 -1.16 -0.24 21.5 87 8 3 4 3 0 2 0  
10 1.32 1.32 59.7 -1.50 -0.42 23.1 85 7 4 6 5 1 0 1  
11 1.22 1.27 113.5 -0.61 -0.07 17.7 84 8 5 4 12 2 0 0  
12 1.21 1.25 116.3 -0.41 -0.04 13.0 82 8 5 4 12 4 1 0  
13 1.22 1.25 115.6 -0.61 -0.13 16.1 86 7 5 5 13 3 0 0  
14 2.29 5.84 130.9 -1.35 -0.09 26.1 76 11 9 4 11 5 2 0  
15 1.45 2.88 155.9 0.72 0.48 13.5 76 5 5 2 14 4 0 0  
16 1.53 2.88 167.8 0.26 0.27 16.9 80 6 5 2 14 3 0 0  
17 1.54 2.91 166.1 0.62 0.48 17.4 76 6 6 1 13 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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