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PDBsum entry 5adm

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Pore analysis for: 5adm calculated with MOLE 2.0 PDB id
5adm
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.02 2.02 36.1 -0.46 0.13 10.6 76 2 3 5 5 5 0 1  HEM 500 A 9M9 800 A ACT 860 A ACT 861 A GOL 880 A
2 1.36 1.32 55.0 -0.88 -0.20 9.6 74 6 2 5 5 4 5 2  
3 1.18 1.35 62.4 -0.51 0.15 12.2 73 5 4 5 8 9 2 1  HEM 500 A H4B 600 A 9M9 800 A ACT 861 A GOL 880 A
HEM 500 B H4B 600 B ACT 860 B
4 2.36 4.28 95.2 -1.26 -0.11 15.0 67 5 4 6 3 7 3 1  HEM 500 B 9M9 800 B ACT 861 B GOL 880 B
5 1.29 1.32 100.5 -0.78 -0.15 10.2 75 5 5 8 11 7 6 3  HEM 500 A 9M9 800 A ACT 860 A
6 1.16 1.39 138.7 -0.25 0.06 10.9 74 6 3 5 12 8 3 2  HEM 500 A H4B 600 A ACT 860 A HEM 500 B H4B 600 B
ACT 860 B
7 1.98 2.00 189.9 -1.40 -0.33 13.4 82 11 5 12 10 4 3 1  HEM 500 A 9M9 800 A ACT 860 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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