 |
PDBsum entry 5adm
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5adm calculated with MOLE 2.0
|
PDB id
|
|
|
|
5adm
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
1 pore,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.02 |
2.02 |
36.1 |
-0.46 |
0.13 |
10.6 |
76 |
 |
2 |
3 |
5 |
5 |
5 |
0 |
1 |
 |
HEM 500 A 9M9 800 A ACT 860 A ACT 861 A GOL 880 A
|
 |
 |
2 |
 |
1.36 |
1.32 |
55.0 |
-0.88 |
-0.20 |
9.6 |
74 |
6 |
2 |
5 |
5 |
4 |
5 |
2 |
|
 |
3 |
 |
1.18 |
1.35 |
62.4 |
-0.51 |
0.15 |
12.2 |
73 |
5 |
4 |
5 |
8 |
9 |
2 |
1 |
HEM 500 A H4B 600 A 9M9 800 A ACT 861 A GOL 880 A HEM 500 B H4B 600 B ACT 860 B
|
 |
4 |
 |
2.36 |
4.28 |
95.2 |
-1.26 |
-0.11 |
15.0 |
67 |
5 |
4 |
6 |
3 |
7 |
3 |
1 |
HEM 500 B 9M9 800 B ACT 861 B GOL 880 B
|
 |
5 |
 |
1.29 |
1.32 |
100.5 |
-0.78 |
-0.15 |
10.2 |
75 |
5 |
5 |
8 |
11 |
7 |
6 |
3 |
HEM 500 A 9M9 800 A ACT 860 A
|
 |
6 |
 |
1.16 |
1.39 |
138.7 |
-0.25 |
0.06 |
10.9 |
74 |
6 |
3 |
5 |
12 |
8 |
3 |
2 |
HEM 500 A H4B 600 A ACT 860 A HEM 500 B H4B 600 B ACT 860 B
|
 |
7 |
 |
1.98 |
2.00 |
189.9 |
-1.40 |
-0.33 |
13.4 |
82 |
11 |
5 |
12 |
10 |
4 |
3 |
1 |
HEM 500 A 9M9 800 A ACT 860 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |