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PDBsum entry 5ad0

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5ad0 calculated with MOLE 2.0 PDB id
5ad0
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.22 27.9 -1.28 -0.30 16.4 83 4 2 2 4 0 3 0  
2 2.68 2.87 28.2 -1.07 -0.30 11.7 72 1 2 2 2 2 2 0  
3 1.37 2.84 60.9 -1.39 -0.37 17.3 77 5 4 3 3 3 1 0  
4 1.41 1.58 73.2 -0.71 -0.14 12.0 80 3 2 3 4 1 2 0  
5 1.31 2.77 81.9 -0.93 -0.19 16.1 82 5 3 3 4 1 1 0  
6 1.17 1.41 85.4 -0.96 -0.25 11.9 75 4 4 4 4 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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