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PDBsum entry 5a6h

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Lyase PDB id
5a6h
Contents
Protein chain
259 a.a.
Ligands
DMS
OE2 ×3
Metals
_ZN
Waters ×274

References listed in PDB file
Key reference
Title An unusual natural product primary sulfonamide: synthesis, Carbonic anhydrase inhibition, And protein X-Ray structures of psammaplin c.
Authors P.Mujumdar, K.Teruya, K.F.Tonissen, D.Vullo, C.T.Supuran, T.S.Peat, S.A.Poulsen.
Ref. J Med Chem, 2016, 59, 5462-5470. [DOI no: 10.1021/acs.jmedchem.6b00443]
PubMed id 27172398
Abstract
Psammaplin C is one of only two described natural product primary sulfonamides. Here we report the synthesis of psammaplin C and evaluate the inhibition profile against therapeutically relevant carbonic anhydrase (CA) zinc metalloenzymes. The compound exhibited unprecedented inhibition of an important cancer-associated isozyme, hCA XII, with a Ki of 0.79 nM. The compound also displayed good isoform selectivity for hCA XII over other CAs. We present the first reported protein X-ray crystal structures of psammaplin C in complex with human CAs. We engineered the easily crystallized hCA II enzyme to mimic both the hCA IX and hCA XII binding sites and then utilized protein X-ray crystallography to determine the binding pose of psammaplin C within the hCA II, hCA IX, and hCA XII mimic active sites, all to high resolution. This is the first time a natural product primary sulfonamide inhibitor has been assessed for inhibition and binding to CAs.
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