PDBsum entry 5a3f Go to PDB code:  Pore analysis for: 5a3f calculated with MOLE 2.0 PDB id 5a3f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.32 39.6 -0.10 -0.05 11.8 75 4 2 0 5 2 1 0   2 1.43 2.56 40.9 -1.49 -0.54 13.1 88 3 3 5 2 0 0 0   3 3.03 4.49 45.1 -2.05 -0.42 28.8 80 5 6 4 5 0 0 0   4 1.81 1.81 56.3 -0.83 -0.29 11.3 79 7 0 5 5 2 1 0   5 1.32 1.32 66.3 -1.17 -0.32 16.4 83 10 2 5 5 1 1 0   6 1.35 1.85 70.5 -1.41 -0.48 19.9 83 3 5 2 2 1 1 0   7 1.22 2.31 80.1 -2.03 -0.52 28.8 85 8 8 7 4 0 0 0   8 2.02 3.05 82.3 -1.96 -0.34 27.0 82 9 7 7 9 1 0 0   9 1.60 3.12 92.3 -1.09 -0.23 16.1 82 6 6 6 5 3 0 0   10 1.21 1.22 108.7 -0.54 -0.18 15.1 81 7 5 5 15 3 1 0   11 1.70 1.70 107.9 -1.91 -0.58 22.6 77 8 11 7 6 1 1 0   12 1.30 1.31 109.9 -1.89 -0.45 24.5 83 9 8 6 7 2 0 0   13 1.40 2.87 116.2 -2.27 -0.56 29.3 79 11 11 6 7 1 0 0   14 1.30 1.93 119.7 -1.37 -0.46 16.6 79 10 9 7 7 2 0 0   15 1.55 3.22 124.5 -1.21 -0.34 15.8 80 11 6 9 8 3 1 0   16 1.32 1.97 130.8 -2.31 -0.64 30.7 81 13 16 9 7 0 0 0   17 1.15 1.99 136.9 0.01 -0.01 13.2 85 9 4 6 24 2 0 0   18 1.15 2.18 139.4 0.49 0.10 10.9 81 6 6 0 18 2 2 0   19 1.36 1.88 153.6 -1.79 -0.47 23.9 78 12 11 9 12 2 1 0   20 1.59 1.62 189.8 -1.32 -0.38 17.8 80 16 9 13 15 4 2 0   21 1.06 2.13 26.0 1.96 0.64 5.7 78 1 1 0 9 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.