spacer
spacer

PDBsum entry 4zx5

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 4zx5 calculated with MOLE 2.0 PDB id
4zx5
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 2.65 61.2 -2.09 -0.41 25.7 82 8 6 6 4 2 1 0  4TM 1102 A DMS 1105 A DMS 1106 A
2 1.33 2.60 62.2 -2.17 -0.39 26.1 85 10 5 6 4 3 0 0  
3 1.34 2.68 64.7 -1.49 -0.24 20.6 86 8 7 5 10 2 0 0  4TM 1102 A
4 1.34 2.65 66.1 -1.77 -0.29 19.2 84 8 6 6 3 4 0 0  
5 1.54 1.68 76.3 -2.13 -0.27 27.8 81 12 5 9 5 5 2 0  4TM 1102 A DMS 1105 A DMS 1106 A
6 1.41 1.41 80.5 -1.90 -0.27 25.4 83 11 5 8 9 5 1 0  4TM 1102 A DMS 1106 A
7 1.43 1.41 98.5 -1.60 -0.10 20.8 80 10 6 7 7 9 1 0  4TM 1102 A DMS 1106 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer