 |
PDBsum entry 4zwj
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4zwj calculated with MOLE 2.0
|
PDB id
|
|
|
|
4zwj
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
10 tunnels,
coloured by tunnel radius |
 |
10 tunnels,
coloured by
tunnel radius
|
10 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.64 |
1.64 |
28.8 |
0.96 |
0.84 |
2.9 |
73 |
 |
0 |
1 |
0 |
5 |
6 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.25 |
2.48 |
30.3 |
0.29 |
0.41 |
3.2 |
68 |
0 |
1 |
1 |
6 |
6 |
0 |
1 |
|
 |
3 |
 |
1.65 |
2.04 |
33.5 |
0.83 |
0.73 |
2.6 |
76 |
1 |
0 |
0 |
7 |
6 |
0 |
0 |
|
 |
4 |
 |
1.32 |
1.47 |
35.0 |
0.53 |
0.52 |
1.8 |
69 |
0 |
0 |
1 |
6 |
6 |
0 |
1 |
|
 |
5 |
 |
1.33 |
1.45 |
37.1 |
0.50 |
0.55 |
2.5 |
70 |
1 |
0 |
1 |
7 |
7 |
0 |
1 |
|
 |
6 |
 |
1.28 |
2.58 |
40.3 |
0.54 |
0.41 |
3.9 |
79 |
0 |
1 |
1 |
10 |
6 |
0 |
0 |
|
 |
7 |
 |
1.64 |
1.63 |
25.2 |
1.09 |
0.63 |
4.7 |
75 |
0 |
1 |
0 |
5 |
5 |
0 |
0 |
|
 |
8 |
 |
1.32 |
1.42 |
35.4 |
0.56 |
0.54 |
1.8 |
71 |
0 |
0 |
1 |
7 |
6 |
0 |
1 |
|
 |
9 |
 |
1.22 |
1.56 |
17.1 |
1.57 |
0.68 |
3.7 |
84 |
0 |
1 |
1 |
7 |
0 |
2 |
0 |
|
 |
10 |
 |
1.49 |
1.49 |
18.4 |
-1.05 |
-0.43 |
21.7 |
85 |
2 |
1 |
0 |
7 |
0 |
2 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |