spacer
spacer

PDBsum entry 4zw6

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 4zw6 calculated with MOLE 2.0 PDB id
4zw6
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.78 62.2 -1.56 -0.35 18.4 85 6 5 7 4 3 1 0  4SY 1101 A GOL 1106 A GOL 1107 A DMS 1109 A
2 1.31 2.55 66.1 -1.58 -0.22 21.4 85 8 8 5 9 2 0 0  4SY 1101 A
3 1.31 2.44 67.0 -1.92 -0.34 26.0 81 9 6 6 5 2 1 0  GOL 1106 A GOL 1107 A DMS 1109 A
4 1.28 1.52 90.0 -1.44 -0.24 17.5 80 10 7 5 5 7 1 0  4SY 1101 A GOL 1106 A GOL 1107 A DMS 1109 A
5 1.34 2.30 94.1 -2.23 -0.29 28.4 77 13 5 6 3 5 1 0  GOL 1108 A DMS 1111 A
6 1.65 1.84 103.3 -2.12 -0.30 28.7 76 13 6 7 4 6 1 0  GOL 1106 A GOL 1107 A GOL 1108 A DMS 1109 A DMS
1111 A
7 1.52 1.68 112.2 -1.69 -0.19 24.0 77 11 7 8 6 7 0 0  4SY 1101 A GOL 1106 A GOL 1107 A GOL 1108 A DMS
1111 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer