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PDBsum entry 4zt9

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Pore analysis for: 4zt9 calculated with MOLE 2.0 PDB id
4zt9
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.56 28.4 -0.90 -0.20 26.0 81 2 5 2 7 1 0 0  
2 4.77 4.77 30.6 -2.44 -0.75 28.5 81 4 4 1 0 0 0 0  A 57 B U 56 D A 65 D C 70 D G 73 D A 75 D A 76 D
3 1.80 1.80 43.5 -1.10 -0.81 15.0 77 1 4 1 2 0 0 0  G 19 B C 20 B G 21 B U 22 B U 23 B U 24 B U 25 B
G 27 B U 63 B
4 1.96 2.16 43.8 -2.29 -0.78 23.1 85 4 5 4 0 1 0 0  G 11 B
5 1.85 1.91 50.8 -2.22 -0.61 21.9 86 6 1 3 1 1 0 0  G 11 B A 12 B U 13 B U 56 B A 75 B U 56 D A 57 D
6 1.37 1.37 59.3 -0.68 -0.29 12.8 74 4 2 0 1 2 0 0  U 24 B U 25 B G 27 B A 28 B A 38 B G 39 B C 40 B
A 41 B A 42 B G 43 B
7 1.86 2.93 59.7 -1.90 -0.58 31.0 85 4 6 3 3 0 2 0  G 11 B U 13 B G 14 B A 15 B G 16 B A 17 B C 18 B
G 19 B U 63 B
8 2.21 2.44 73.1 -1.57 -0.51 16.8 91 6 3 5 3 1 0 0  G 11 D
9 1.79 1.79 99.7 -1.83 -0.79 22.9 86 5 6 6 3 0 1 0  G 19 D C 20 D G 21 D U 22 D U 23 D U 24 D U 25 D
G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D
10 1.32 1.60 110.6 -1.44 -0.57 17.7 81 10 4 5 1 1 0 1  G 54 B C 55 B U 56 B G 73 B A 74 B G 21 D U 22 D
U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D
A 41 D A 42 D G 43 D U 45 D A 46 D A 48 D A 49 D
U 50 D G 53 D G 54 D C 55 D U 56 D A 57 D
11 1.78 1.78 110.5 -1.24 -0.57 15.1 78 2 9 4 3 3 0 0  A 12 D U 13 D G 14 D A 15 D G 16 D A 17 D C 18 D
G 19 D C 20 D G 21 D U 22 D U 23 D U 24 D U 25 D
G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D
12 1.79 1.80 148.4 -1.59 -0.65 21.0 87 8 6 4 5 1 0 0  G 11 D A 12 D U 13 D G 14 D A 15 D G 16 D A 17 D
C 18 D G 19 D C 20 D G 21 D U 22 D U 23 D U 24 D
U 25 D G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D
G 43 D
13 1.38 2.30 149.7 -1.59 -0.42 20.2 81 16 9 12 12 4 5 0  A 68 D A 69 D A 78 D G 79 D U 80 D U 82 D
14 1.36 1.57 157.9 -1.50 -0.44 17.3 83 10 5 10 3 2 1 1  A 75 B A 76 B A 77 B A 78 B G 79 B G 21 D U 22 D
U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D
A 41 D A 42 D G 43 D U 45 D A 46 D A 48 D A 49 D
U 50 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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