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PDBsum entry 4zt9
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Pore analysis for: 4zt9 calculated with MOLE 2.0
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PDB id
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4zt9
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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14 pores,
coloured by radius |
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14 pores,
coloured by radius
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14 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.20 |
1.56 |
28.4 |
-0.90 |
-0.20 |
26.0 |
81 |
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2 |
5 |
2 |
7 |
1 |
0 |
0 |
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2 |
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4.77 |
4.77 |
30.6 |
-2.44 |
-0.75 |
28.5 |
81 |
4 |
4 |
1 |
0 |
0 |
0 |
0 |
A 57 B U 56 D A 65 D C 70 D G 73 D A 75 D A 76 D
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3 |
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1.80 |
1.80 |
43.5 |
-1.10 |
-0.81 |
15.0 |
77 |
1 |
4 |
1 |
2 |
0 |
0 |
0 |
G 19 B C 20 B G 21 B U 22 B U 23 B U 24 B U 25 B G 27 B U 63 B
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4 |
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1.96 |
2.16 |
43.8 |
-2.29 |
-0.78 |
23.1 |
85 |
4 |
5 |
4 |
0 |
1 |
0 |
0 |
G 11 B
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5 |
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1.85 |
1.91 |
50.8 |
-2.22 |
-0.61 |
21.9 |
86 |
6 |
1 |
3 |
1 |
1 |
0 |
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G 11 B A 12 B U 13 B U 56 B A 75 B U 56 D A 57 D
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6 |
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1.37 |
1.37 |
59.3 |
-0.68 |
-0.29 |
12.8 |
74 |
4 |
2 |
0 |
1 |
2 |
0 |
0 |
U 24 B U 25 B G 27 B A 28 B A 38 B G 39 B C 40 B A 41 B A 42 B G 43 B
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7 |
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1.86 |
2.93 |
59.7 |
-1.90 |
-0.58 |
31.0 |
85 |
4 |
6 |
3 |
3 |
0 |
2 |
0 |
G 11 B U 13 B G 14 B A 15 B G 16 B A 17 B C 18 B G 19 B U 63 B
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8 |
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2.21 |
2.44 |
73.1 |
-1.57 |
-0.51 |
16.8 |
91 |
6 |
3 |
5 |
3 |
1 |
0 |
0 |
G 11 D
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9 |
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1.79 |
1.79 |
99.7 |
-1.83 |
-0.79 |
22.9 |
86 |
5 |
6 |
6 |
3 |
0 |
1 |
0 |
G 19 D C 20 D G 21 D U 22 D U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D
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10 |
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1.32 |
1.60 |
110.6 |
-1.44 |
-0.57 |
17.7 |
81 |
10 |
4 |
5 |
1 |
1 |
0 |
1 |
G 54 B C 55 B U 56 B G 73 B A 74 B G 21 D U 22 D U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D U 45 D A 46 D A 48 D A 49 D U 50 D G 53 D G 54 D C 55 D U 56 D A 57 D
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11 |
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1.78 |
1.78 |
110.5 |
-1.24 |
-0.57 |
15.1 |
78 |
2 |
9 |
4 |
3 |
3 |
0 |
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A 12 D U 13 D G 14 D A 15 D G 16 D A 17 D C 18 D G 19 D C 20 D G 21 D U 22 D U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D
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12 |
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1.79 |
1.80 |
148.4 |
-1.59 |
-0.65 |
21.0 |
87 |
8 |
6 |
4 |
5 |
1 |
0 |
0 |
G 11 D A 12 D U 13 D G 14 D A 15 D G 16 D A 17 D C 18 D G 19 D C 20 D G 21 D U 22 D U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D
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13 |
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1.38 |
2.30 |
149.7 |
-1.59 |
-0.42 |
20.2 |
81 |
16 |
9 |
12 |
12 |
4 |
5 |
0 |
A 68 D A 69 D A 78 D G 79 D U 80 D U 82 D
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14 |
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1.36 |
1.57 |
157.9 |
-1.50 |
-0.44 |
17.3 |
83 |
10 |
5 |
10 |
3 |
2 |
1 |
1 |
A 75 B A 76 B A 77 B A 78 B G 79 B G 21 D U 22 D U 23 D U 24 D U 25 D G 27 D A 28 D G 29 D C 30 D A 41 D A 42 D G 43 D U 45 D A 46 D A 48 D A 49 D U 50 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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