spacer
spacer

PDBsum entry 4zs2

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 4zs2 calculated with MOLE 2.0 PDB id
4zs2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.72 31.7 -1.40 0.03 23.7 79 5 2 2 4 3 0 0  AKG 601 A FLU 602 A MN 603 A
2 1.22 1.70 34.5 -0.04 0.31 15.9 81 5 0 4 6 4 0 0  AKG 601 A FLU 602 A MN 603 A
3 1.25 1.73 37.0 0.17 0.30 13.1 81 5 0 3 8 3 1 0  AKG 601 A FLU 602 A MN 603 A
4 1.38 2.45 21.4 0.38 -0.09 7.4 90 0 1 3 5 0 0 0  
5 1.24 1.93 25.9 0.19 0.45 6.7 66 2 0 1 5 4 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer