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PDBsum entry 4zr5

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4zr5 calculated with MOLE 2.0 PDB id
4zr5
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.19 2.92 29.6 -2.09 -0.55 26.0 81 5 5 4 1 2 0 0  RDF 802 B
2 1.73 1.88 50.0 -1.82 -0.52 22.5 85 7 7 8 1 2 0 0  RDF 802 B
3 3.02 4.56 52.3 -2.42 -0.45 25.3 86 7 3 8 4 0 2 0  
4 1.94 3.36 76.0 -2.20 -0.30 19.7 82 10 4 12 3 6 3 0  RDF 802 B
5 1.96 3.59 80.0 -1.54 -0.13 18.2 85 6 4 12 4 6 2 0  RDF 802 A
6 1.96 3.60 81.5 -2.07 -0.28 18.9 83 8 3 13 2 6 2 0  RDF 802 A
7 1.95 3.09 86.8 -2.07 -0.37 20.4 84 10 6 14 3 5 2 0  RDF 802 A
8 1.88 3.10 88.2 -2.51 -0.51 21.3 82 12 5 15 1 5 2 0  RDF 802 A
9 1.86 1.93 94.1 -1.75 -0.30 20.2 85 10 6 15 4 6 3 0  RDF 802 B
10 1.94 3.38 94.8 -2.19 -0.53 21.0 85 12 7 15 1 7 2 0  RDF 802 A RDF 802 B
11 1.80 2.00 96.4 -2.00 -0.32 19.2 85 12 6 16 4 6 3 0  RDF 802 B
12 1.29 1.43 98.9 -1.63 -0.48 20.0 87 8 9 9 5 4 2 0  RDF 802 A
13 1.73 1.84 99.3 -2.06 -0.65 21.7 85 11 10 12 3 4 2 0  RDF 802 A
14 1.64 1.71 109.0 -1.24 -0.23 16.9 82 9 8 10 6 6 1 0  NAG 803 A RDF 802 B
15 1.30 1.49 120.3 -1.67 -0.34 19.0 87 11 8 17 4 8 2 0  RDF 802 A RDF 802 B
16 1.71 1.89 122.4 -2.05 -0.51 21.1 86 14 9 20 2 8 2 0  RDF 802 A RDF 802 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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