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PDBsum entry 4zr1
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Tunnel analysis for: 4zr1 calculated with  MOLE 2.0
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PDB id
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4zr1
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.33 |
1.93 |
36.8 |
0.48 |
0.90 |
13.7 |
71 |
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7 |
0 |
0 |
9 |
7 |
0 |
1 |
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TRD 405 B
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2 |
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1.22 |
2.49 |
45.6 |
0.33 |
0.31 |
13.6 |
77 |
9 |
0 |
1 |
12 |
3 |
1 |
0 |
TRD 406 B
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3 |
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1.20 |
2.52 |
48.9 |
-0.22 |
0.18 |
12.5 |
76 |
9 |
0 |
0 |
10 |
5 |
3 |
0 |
BOG 403 B TRD 406 B TRD 407 B
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4 |
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1.21 |
2.43 |
57.3 |
-0.53 |
0.25 |
12.5 |
72 |
10 |
0 |
0 |
8 |
8 |
2 |
0 |
TRD 410 A BOG 403 B TRD 406 B TRD 407 B TRD 409 B
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5 |
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1.25 |
2.60 |
61.3 |
0.32 |
0.27 |
10.4 |
73 |
10 |
0 |
0 |
11 |
7 |
3 |
0 |
BOG 403 A BOG 408 A TRD 406 B
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6 |
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1.21 |
1.25 |
17.6 |
-1.46 |
0.05 |
19.3 |
72 |
3 |
2 |
1 |
1 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program